FastQCFastQC Report
Tue 14 Jan 2025
4DNFITZJ8GSS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFITZJ8GSS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27569953
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1399610.5076577388434431No Hit
CAGACGCGCGGTATTTGCATGTTG1032600.3745381792997616No Hit
CAGACGCGGACCAGGTGACCTGGT622250.22569860746588866No Hit
CAGACGCGCTGTATTGAATCCGTT484370.1756876408167979No Hit
CAGACGCGGCGAGGTTGGCTTTAA396170.1436962913937503No Hit
CAGACGCGTGCCTCGACCTGATTC376070.13640574577693332No Hit
CAGACGCGTACCGCACTTAGGCCT346910.1258290139268645No Hit
GGGGGGGGGGGGGGGGGGGGGGGG336420.12202414708505306No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)