FastQCFastQC Report
Tue 14 Jan 2025
4DNFITTMIVNH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFITTMIVNH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85534546
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC2034420.23784775802749922No Hit
CAGACGCGAACTTCGCTCATCATA1403160.16404599844371653No Hit
CAGACGCGTAAGGTCGAGTCCCTG1262550.14760702652235974No Hit
CAGACGCGCAGAGGGACATCCACC1167080.13644545444831144No Hit
CAGACGCGGATGGCTGAGCTAACG1075610.12575152968018324No Hit
CAGACGCGCTGTATTGAGGAAGGC1073220.125472110414896No Hit
CAGACGCGTAAGGTTACCCGGTTC1069500.12503719842039027No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)