FastQCFastQC Report
Tue 14 Jan 2025
4DNFITTJZQ3M.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFITTJZQ3M.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37114229
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCTTCATTTGTGGGTGA936510.2523317943638274No Hit
CAGACGCGCCAGGCTTGCGTGTTA886200.23877634639803508No Hit
CAGACGCGACATGTTTGAATCGTT868120.2339048993850849No Hit
CAGACGCGCAGGAATCTAGGCCCT810220.21830441365224104No Hit
CAGACGCGGGTTCATCTAAGAATC757840.20419122811361645No Hit
CAGACGCGCACTAAGGAAGCTAAT736710.19849799385567188No Hit
CAGACGCGTGGTTATCTACTACGT726850.19584133082759173No Hit
CAGACGCGGTTTAACTGGGAACAT708990.19102916027165753No Hit
CAGACGCGCTATTAGCTACGGGTA663250.17870504598115186No Hit
CAGACGCGATAGCCTCTCCCTCAC606950.16353566175387882No Hit
CAGACGCGAACGATTGATTCCGCA590030.15897676333246746No Hit
CAGACGCGGGTATAGTGTCACGAT516980.13929428521874992No Hit
CAGACGCGATGTGATGATTTGGGA512310.1380360076993651No Hit
CAGACGCGCTTGACCGAGGTTAGC509690.1373300789839929No Hit
CAGACGCGGTAACTAGAAGGCTGT499160.134492892200455No Hit
CAGACGCGGTAATTGGATCCTAAT487240.13128118598395241No Hit
CAGACGCGTTTCCGGGATTACGTT458370.12350249819280902No Hit
CAGACGCGGTTCCTTTGCAATCCA456030.1228720122409117No Hit
CAGACGCGGTTGTTGCTAAGCACG445530.12004290861060322No Hit
CAGACGCGAAGTTAGCTTCATTAG442930.11934236866405065No Hit
CAGACGCGCATGGTGACGCAATCA434490.1170683082221646No Hit
CAGACGCGGGTTATCCTGATATAG433900.11690933954198537No Hit
CAGACGCGGGATCCAGACTTCGAC430570.11601210953351611No Hit
CAGACGCGAGCTTGTCTAAAGGCC429720.1157830868586816No Hit
CAGACGCGAGGCTAATGAATCAGG426780.11499093784219523No Hit
CAGACGCGCTTAGTGTGCCTTTAT423820.11419340005688924No Hit
CAGACGCGCTAGTTTGAGGGTGGA422410.11381349185510495No Hit
CAGACGCGGATGTAACTAGCCAGA397170.10701286560472535No Hit
CAGACGCGGTGAGGAACTATCCGT391750.10555250925460422No Hit
CAGACGCGCTCAAGGACCACAATA387770.1044801442594968No Hit
CAGACGCGGCTTTGGTGTAACGGG385540.10387929653610749No Hit
CAGACGCGTGGTCAAGACAACAAC385510.10387121338287802No Hit
CAGACGCGGCATATAGATACTTAC385480.10386313022964858No Hit
CAGACGCGATGCTATTGAGCGCGA383100.103221866740112No Hit
CAGACGCGACTAGTTTGAGGAGAG382970.10318683974278436No Hit
CAGACGCGGGAAGCAACCCGGATA382010.10292817883944187No Hit
CAGACGCGTCACGTTACGCAAGGA380140.10242432895480598No Hit
CAGACGCGAGCAAACTGTGCTGAT375430.10115527389778191No Hit
CAGACGCGTGTGCGGGATAACGTG375280.10111485813163464No Hit
CAGACGCGTGCATCGCTGATCACT373930.10075111623630925No Hit
CAGACGCGAACTTGGACTAACCTC373550.1006487296287362No Hit
CAGACGCGCTGAGCAACAGATAGA372640.10040354064744278No Hit
CAGACGCGCAATTGGGAGTAGTTA371750.10016374043496903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)