FastQCFastQC Report
Tue 14 Jan 2025
4DNFITN2JIJG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFITN2JIJG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12612936
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCTATAGTGTAGATCTCGGTGG940900.7459801587830145No Hit
ATAGAGAGGTGTAGATCTCGGTGG498700.3953877194017317No Hit
ATACAAAAGTGTAGATCTCGGTGG435540.3453121461965715No Hit
CAGACGCGGCTTATTACAATTGGC423700.3359249583126403No Hit
CAGACGCGTGTAAGTACCACAAAT144550.11460456153904214No Hit
CAGACGCGTCAGCAAGAAACCGCA129430.10261686890348132No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)