FastQCFastQC Report
Tue 14 Jan 2025
4DNFIT3YI9FB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIT3YI9FB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66011425
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGGTTATCTCCTTAAA2629700.39837043360297103No Hit
CAGACGCGCCGGTTCACCCGGAAT1889120.2861807634057286No Hit
CAGACGCGTGCAAGGTGGCCAATC1562120.2366438839943237No Hit
CAGACGCGGCTTGTGTGTTCATTC1343330.2034996214670415No Hit
CAGACGCGCCTAAGGACTAGGCTG1233310.18683280962348564No Hit
CAGACGCGTTGAAGCGATGCCTCA1051630.15931030120922252No Hit
CAGACGCGTGCTAATCTTAATTCG1007910.15268720528302487No Hit
CAGACGCGCGCTAATTGCTCAAAC916490.13883808749773238No Hit
CAGACGCGACCAAATGAGTTTGTC886870.13435098545441188No Hit
CAGACGCGTGCTAGCCTAGGCTTT815260.12350286333009779No Hit
CAGACGCGCACGGATACCACAAAT743040.11256233295978688No Hit
CAGACGCGAGGCGGTTGAGGAAGG740030.11210635128691739No Hit
CAGACGCGGAGGTGGGACTTAGAG736570.11158219959650924No Hit
CAGACGCGTAGTCAAACTATGGAT714790.10828277074763952No Hit
CAGACGCGCTTAATGCTAGTAAGT709340.10745715609078277No Hit
CAGACGCGCAATTGAACAAGCCAT666600.1009825193138915No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)