FastQCFastQC Report
Tue 14 Jan 2025
4DNFISZGFN39.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFISZGFN39.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37535126
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCTTCATTTGTGGGTGA957800.25517431325526924No Hit
CAGACGCGCCAGGCTTGCGTGTTA883890.2354834242463979No Hit
CAGACGCGCAGGAATCTAGGCCCT856750.2282528637308957No Hit
CAGACGCGGGTTCATCTAAGAATC758870.20217595646275435No Hit
CAGACGCGTGGTTATCTACTACGT722690.19253698522285498No Hit
CAGACGCGACATGTTTGAATCGTT720300.1919002483167367No Hit
CAGACGCGGTTTAACTGGGAACAT720090.19184430072247527No Hit
CAGACGCGCTATTAGCTACGGGTA660130.1758699304752567No Hit
CAGACGCGCACTAAGGAAGCTAAT639100.17026717853564685No Hit
CAGACGCGATAGCCTCTCCCTCAC630000.16784278278431783No Hit
CAGACGCGAACGATTGATTCCGCA613380.1634149303241982No Hit
CAGACGCGGGTATAGTGTCACGAT523920.13958125516882505No Hit
CAGACGCGATGTGATGATTTGGGA513570.1368238380230827No Hit
CAGACGCGGTAACTAGAAGGCTGT509470.13573152784940698No Hit
CAGACGCGGTAATTGGATCCTAAT502920.13398649574268112No Hit
CAGACGCGCTTGACCGAGGTTAGC502770.13394653317535152No Hit
CAGACGCGGTTCCTTTGCAATCCA473590.1261724817441668No Hit
CAGACGCGAAGTTAGCTTCATTAG467670.12459529242022525No Hit
CAGACGCGTTTCCGGGATTACGTT463150.12339108705802666No Hit
CAGACGCGCTTAGTGTGCCTTTAT450030.11989569450226437No Hit
CAGACGCGGTTGTTGCTAAGCACG448340.11944544957701753No Hit
CAGACGCGGGATCCAGACTTCGAC442180.11780432014534867No Hit
CAGACGCGAGGCTAATGAATCAGG441530.11763114902025372No Hit
CAGACGCGGGTTATCCTGATATAG441160.11753257468750739No Hit
CAGACGCGCTAGTTTGAGGGTGGA439730.11715159821229854No Hit
CAGACGCGCATGGTGACGCAATCA431370.11492435112646218No Hit
CAGACGCGAGCTTGTCTAAAGGCC429720.11448476288583659No Hit
CAGACGCGGTGAGGAACTATCCGT412180.10981180667942875No Hit
CAGACGCGGATGTAACTAGCCAGA410560.10938021095226909No Hit
CAGACGCGGGAAGCAACCCGGATA403720.10755791788203935No Hit
CAGACGCGCTCAAGGACCACAATA402390.10720358311838356No Hit
CAGACGCGGCTTTGGTGTAACGGG400100.10659348792381836No Hit
CAGACGCGAACTTGGACTAACCTC397190.10581821411762413No Hit
CAGACGCGTGGTCAAGACAACAAC393950.10495502266330477No Hit
CAGACGCGCTACCGCACATTACCT393390.1048058290786076No Hit
CAGACGCGCAATTGGGAGTAGTTA392710.10462466544004674No Hit
CAGACGCGGCATATAGATACTTAC391350.10426233816292504No Hit
CAGACGCGACTAGTTTGAGGAGAG390340.10399325687623906No Hit
CAGACGCGAGCAAACTGTGCTGAT387220.1031620354757834No Hit
CAGACGCGTGCATCGCTGATCACT386710.10302616274686276No Hit
CAGACGCGTCACGTTACGCAAGGA385070.10258923867739247No Hit
CAGACGCGCAAACTAACCTTGAGG382130.10180597235773232No Hit
CAGACGCGTGTGCGGGATAACGTG381790.10171539053845191No Hit
CAGACGCGGCTACAAACTAACGGC381180.1015528760979782No Hit
CAGACGCGCTGAGCAACAGATAGA379410.10108131780348893No Hit
CAGACGCGGTAGCAGCTTACTTCC378470.1008308857148901No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)