FastQCFastQC Report
Tue 14 Jan 2025
4DNFISW2Z1UW.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFISW2Z1UW.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60559911
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA1204770.19893853542816467No Hit
CAGACGCGTACGTTACTTCGCTCC1131690.18687114649161224No Hit
CAGACGCGTTTGTACGAAGCTAAT805520.1330120845124756No Hit
CAGACGCGGCGATTAACCATAATG629320.10391692946840692No Hit
CAGACGCGGCCAAATACTAAATGC626490.1034496236297309No Hit
CAGACGCGCAGTTAGGAGCAACAC616190.10174882852783584No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)