FastQCFastQC Report
Tue 14 Jan 2025
4DNFIST7EXBO.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIST7EXBO.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76918408
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACAATTGGATCTTTGA1636340.21273711229176767No Hit
CAGACGCGCCATCACGAGTCAATA1026690.133477801568644No Hit
CAGACGCGCAGCTACCTGGATCCC999220.12990648480400166No Hit
CAGACGCGGGATCCAGAACCAAAT801540.10420652491923649No Hit
CAGACGCGTAACCGGACGGTTATG791940.10295844916603059No Hit
CAGACGCGTTCCTCACTTTCTTCG774990.10075481541427639No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)