FastQCFastQC Report
Tue 14 Jan 2025
4DNFISM7GIFP.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFISM7GIFP.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences239249136
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGAGGCTTGGCCATCA9431260.3942024685096459No Hit
CAGACGCGGACGAGGGAAGCTAAT8169460.34146246613822673No Hit
CAGACGCGTAGCCACCTCACTAAT6045900.2527031069403737No Hit
CAGACGCGAACAGCTACGCGTTTC4506450.18835804698579978No Hit
CAGACGCGCAGAGGGACCCAAACG3999710.1671776152203116No Hit
CAGACGCGGATTCACCTAAGGATT3634710.1519215517668578No Hit
CAGACGCGAAGTCGCGATCCCTGA3285830.13733926295140308No Hit
CAGACGCGACCGGACACTTCCTGA3233540.13515367512131787No Hit
CAGACGCGACGCGAACTCATGACC2914860.12183366881625855No Hit
CAGACGCGGATTGCAACTTCATCG2819780.11785956878021912No Hit
CAGACGCGGTCACAGGACCTTGTG2743080.11465370558328787No Hit
CAGACGCGTGCTAATCTATACCTG2676260.11186080103545286No Hit
CAGACGCGAGCCATAACGTATTTC2614680.10928691504240165No Hit
CAGACGCGTTGCAAGGAGGAGGAC2611790.1091661204577976No Hit
CAGACGCGGCCTTAGTGTAACCTG2606930.10896298492797901No Hit
CAGACGCGCATAGCTTGATTGTGT2578170.1077608907227151No Hit
CAGACGCGGCTGACAGAGTTGCCC2557390.1068923400417212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)