FastQCFastQC Report
Tue 14 Jan 2025
4DNFISG2KR3I.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFISG2KR3I.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25633493
Sequences flagged as poor quality0
Sequence length24
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTGAACCGACAGAATC1409790.5499796691773532No Hit
CAGACGCGCGGTATTTGCATGTTG951190.3710731112611145No Hit
CAGACGCGGACCAGGTGACCTGGT710260.2770827994452414No Hit
CAGACGCGCTGTATTGAATCCGTT462840.18056064384202342No Hit
CAGACGCGTGCCTCGACCTGATTC444480.17339813969169166No Hit
CAGACGCGGCGAGGTTGGCTTTAA413820.16143722589816378No Hit
CAGACGCGTACCGCACTTAGGCCT406370.15853087208988645No Hit
GGGGGGGGGGGGGGGGGGGGGGGG383180.14948411439673867No Hit
CAGACGCGAGTTAACGAGCGAACT317460.12384578254707619No Hit
CAGACGCGCTTACTGACAATTGGC278010.10845576137438624No Hit
CAGACGCGTAGGCATGACCGTTGT277360.10820218688104662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)