FastQCFastQC Report
Tue 14 Jan 2025
4DNFIRZL37AD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIRZL37AD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92249142
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC2126330.23049862078934025No Hit
CAGACGCGAACTTCGCTCATCATA1879930.20378834526179118No Hit
CAGACGCGTAAGGTCGAGTCCCTG1633220.17704446508564817No Hit
CAGACGCGCAGAGGGACATCCACC1553730.1684275827736154No Hit
CAGACGCGGATGGCTGAGCTAACG1464700.158776544501628No Hit
CAGACGCGCTGTATTGAGGAAGGC1431200.1551450744116406No Hit
CAGACGCGCTGTATTGAAATATGC1147510.12439248486452047No Hit
CAGACGCGTGTCAATCTACTCCTC1112800.12062984824292458No Hit
CAGACGCGTAAGGTTACCCGGTTC1084380.1175490607815084No Hit
CAGACGCGCAGTAATACTTGTTGC1050660.11389374223122857No Hit
GGGGGGGGGGGGGGGGGGGGGGGG1035510.11225145053381635No Hit
CAGACGCGGCTTAAAGACAAACTG1015670.1101007530238059No Hit
CAGACGCGTACGGACACGTAGTTG1009320.10941239973809187No Hit
CAGACGCGGCGGTACACGCAATTG966280.10474677368814986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)