FastQCFastQC Report
Tue 14 Jan 2025
4DNFIRKG8UJZ.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIRKG8UJZ.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84294015
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAATCCACCTACTGATC3151870.3739138537890264No Hit
CAGACGCGGCTCAAGGACTAAGAC1841880.21850661639500737No Hit
CAGACGCGTACCTCCTGGTCCTGA1636620.19415613314895488No Hit
CAGACGCGCTGGCAGGAGGCGGAA1608340.1908012093148013No Hit
CAGACGCGAACGAATCTGCAACAG1233940.14638524455146668No Hit
CAGACGCGAGAGCTGCTAGGATCG975820.11576385345982157No Hit
CAGACGCGACCTCGCGAGGAACAA884820.10496830646873329No Hit
CAGACGCGCCAAATAACCTTAGTC870320.1032481368932302No Hit
CAGACGCGATAAAGGACCTCACTA867960.10296816446576901No Hit
CAGACGCGCTAACGGACAGCCTAA845170.10026453242261624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)