FastQCFastQC Report
Thu 11 Oct 2018
data.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamedata.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences162102850
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCCT3815900.014.3293814
TAGGACG104700.014.0799834
GATCCTG1696850.011.9908355
GATCCTT1437500.011.674355
AAGGCGT139950.011.5430146
GGCGTGC104750.011.2549848
GTGCGCC89300.011.23701711
GCGCCAC105450.011.11626213
GGATCGA8857050.011.0704841
TGCGCCA114250.010.96898912
CGTGCGC65950.010.88287310
TATGGCG121200.010.84121316
TCGATCC9028950.010.7624943
GTAGGAC267950.010.6841783
AAAGGCG163450.010.6569395
GTCCTAC276900.010.5745621
TATACTG483550.010.4344765
AGGACGT137250.010.3956915
GATCCTC1045550.010.3941475
GTATTAG370900.010.3035981
Produced by FastQC (version 0.11.5)