FastQCFastQC Report
Tue 14 Jan 2025
4DNFIR5ZAD1L.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIR5ZAD1L.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79684607
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACAATTGGATCTTTGA1636050.20531568913930892No Hit
CAGACGCGCCATCACGAGTCAATA1392020.17469120478940178No Hit
CAGACGCGCAGCTACCTGGATCCC1304750.1637392777754429No Hit
CAGACGCGTAACCGGACGGTTATG1052520.13208573645848565No Hit
CAGACGCGGGATCCAGAACCAAAT1038920.1303790078302074No Hit
CAGACGCGTTCCTCACTTTCTTCG1032560.12958086120698317No Hit
GGGGGGGGGGGGGGGGGGGGGGGG908490.1140107273165067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)