FastQCFastQC Report
Tue 14 Jan 2025
4DNFIQE873RG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIQE873RG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences43826526
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT1676610.3825559890373241No Hit
CAGACGCGTAAGGCTGACTTACAT1571520.3585773602041832No Hit
CAGACGCGGTCACCATGTAACGAA1170840.26715327607759737No Hit
CAGACGCGATAGCTCCTTAACCGC1025260.23393595011386484No Hit
CAGACGCGCATGGCGGAGTCGCAA1009340.23030344682122422No Hit
CAGACGCGGGTTACAACCTTTAGC971980.22177892904402235No Hit
CAGACGCGTCTCAAACTTCAATAC968580.2210031431649408No Hit
CAGACGCGTTTGAGCTGAGGAACT933710.21304677445800746No Hit
CAGACGCGGTCTAGCTGTCATCAG654960.14944374098918997No Hit
CAGACGCGTGCTAGCCTATCCTCC629390.14360937483386202No Hit
CAGACGCGGGGAGGACTCGATTAT620450.14156951431651235No Hit
CAGACGCGCCTTTCTGATTGCTAT554280.12647135207568128No Hit
GGGGGGGGGGGGGGGGGGGGGGGG530680.12108648538558589No Hit
CAGACGCGAAGCACGCTCCATCCC505770.1154027129597267No Hit
CAGACGCGTGTGAGCACGCCACTT505650.11537533228164149No Hit
CAGACGCGCCTAAGGACCTCGACC491860.11222883602501371No Hit
CAGACGCGAGGACTTACGTAGCTA489720.11174054726582709No Hit
CAGACGCGCTAACGGACAAAGGTA487790.11130017469328964No Hit
CAGACGCGACAAAGAACTAATGCA481260.10981020946081832No Hit
CAGACGCGTAGGTAGCTTAACGGA474800.10833621629056339No Hit
CAGACGCGTAAGGCTGATCCGTCA454650.10373854409541838No Hit
CAGACGCGGAAACTCACACAAAGA450540.10280075587099921No Hit
CAGACGCGGCTGCAAGAGGGAGCA449790.10262962663296653No Hit
CAGACGCGCCTATGGCTAAGGTGC446020.10176941699645552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)