FastQCFastQC Report
Tue 14 Jan 2025
4DNFIQ7DJG7H.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIQ7DJG7H.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33191491
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCGATTAGGACTCGCTA4218021.2708136552226592No Hit
CAGACGCGCTTGCGCACACCGTTC2557150.7704233594085906No Hit
CAGACGCGGGTTGCAGATAACTTC1904540.5738036896263563No Hit
CAGACGCGGATTTAGGAACAGGAA1684600.5075397185381036No Hit
CAGACGCGGGGAGGACTTGTTGCG1490820.4491572855223647No Hit
CAGACGCGATTGGGATGTGCGGAA1368800.41239485143948496No Hit
CAGACGCGTGTAAGTACCGTAAAT1111080.3347484450156216No Hit
CAGACGCGGACTCAAACCAGGTTG1007100.3034211388695976No Hit
CAGACGCGAAACTAGCTCCTCACC961910.28980620364418097No Hit
CAGACGCGGACTTACCTTTATCCC844520.2544387053898844No Hit
CAGACGCGCATCATGTGTCACGGC745080.22447921968916673No Hit
CAGACGCGTGCTTCCTGGTCCTAG651210.19619787493125873No Hit
CAGACGCGAGTGAATCTTTATCCC640420.19294704175838318No Hit
CAGACGCGACGGCTCCTATTGGCT625490.1884489009547658No Hit
CAGACGCGGGACCATGAGTCCCTG620260.18687319590433585No Hit
CAGACGCGCGGTATTTGAATCGAG595340.17936524755697175No Hit
CAGACGCGGATGAAGGATAACCTT588060.1771719143318991No Hit
CAGACGCGAAATGGAACACCTTGC586060.17656935025907694No Hit
CAGACGCGCGCCTCTCTCAAACTT583360.17575588876076703No Hit
CAGACGCGCGAACTAGAAGGCTAC580080.1747676836813387No Hit
CAGACGCGCATCCAGCTCAAGAAC576160.17358665809860727No Hit
CAGACGCGGCTATGGGAGTCCCTG567500.17097755566328732No Hit
CAGACGCGACAGGCTGAGCTTTGT548850.1653586456842207No Hit
CAGACGCGACAACTAGATACTTCA518690.15627197946606255No Hit
CAGACGCGATATCAGGATTACTTG492630.14842056959718983No Hit
CAGACGCGCAATGAGCTCTAGCCA476220.14347653137968402No Hit
CAGACGCGCGGCAAGCTTAGTGCC463140.1395357623434271No Hit
CAGACGCGTAATCCGTGCAGCAAG444320.1338656344181706No Hit
CAGACGCGTCGCAACCTAAGCACG410110.12355877595254759No Hit
CAGACGCGACTTGTCGATTCATGT410110.12355877595254759No Hit
CAGACGCGCTTGAATCTTGAGGAT405850.12227531447743639No Hit
CAGACGCGGGGTAGCTGCAAGGGT394420.11883166080125776No Hit
CAGACGCGGAATCCGGACTCAATT391010.11780428905709599No Hit
CAGACGCGCCTATGGCTGGCTATT388600.1170781993493453No Hit
CAGACGCGCCCTTTACTAAGCTAA385390.11611108401246573No Hit
CAGACGCGTCAGTAAACCTGGTGA373620.11256499444390733No Hit
CAGACGCGTACGGGCGAGGCAATC357590.10773544340023772No Hit
CAGACGCGCAGTAAGCTGGCCAAA352980.10634653321238265No Hit
CAGACGCGCCGTTAGCTTGATGAG352410.10617480245162834No Hit
CAGACGCGTGGAGCGCTTCTCACT344400.10376153333997559No Hit
CAGACGCGCCACAAAGACCATTAT336450.10136634115050752No Hit
CAGACGCGCGCCTCTCTATCCTAG336220.10129704628213296No Hit
CAGACGCGATATCAGGACATTACT331950.10001057198665765No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)