FastQCFastQC Report
Tue 14 Jan 2025
4DNFIPZ9MU1Z.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIPZ9MU1Z.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55979821
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGTGGACACTGATGGC1496090.2672552311305176No Hit
CAGACGCGGATGCAGCTTCAAGGA1320590.23590464856970517No Hit
GGGGGGGGGGGGGGGGGGGGGGGG716620.12801398561099364No Hit
CAGACGCGTCCCTTTGAGGCTTGA668630.11944125366174357No Hit
CAGACGCGAGCAAACTGGTTTGGC615890.11002000167167379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)