FastQCFastQC Report
Tue 14 Jan 2025
4DNFIPRHZF5A.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIPRHZF5A.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44380422
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTACGTAACGCAATGT1293940.29155648857958133No Hit
CAGACGCGCTGGATCCTAAGGTCG721180.16249958145959045No Hit
CAGACGCGCACTATACTCACCCTC675180.15213465072504267No Hit
CAGACGCGTGGTCAAGATGGGCGT611990.13789639043991064No Hit
CAGACGCGAACTAAGCTATGGACG597650.13466523594570595No Hit
CAGACGCGCCTTTGGGATGACTTT578290.13030295205394848No Hit
CAGACGCGACATAACGACACTAAG571490.1287707449018849No Hit
CAGACGCGAGCTTGAACCGCCCAT543830.12253826698628509No Hit
CAGACGCGCAGTTAGGAACAGGCT534710.12048330680587038No Hit
CAGACGCGCCATTACACGCAATCA526430.11861761927365179No Hit
CAGACGCGGTCAATCCTAAGCGCA516530.11638690591991216No Hit
CAGACGCGCTAACGGACGGGAACA489610.11032116819438986No Hit
CAGACGCGCTATTTGGAGTCAATA489270.11024455783678669No Hit
CAGACGCGTAGCCCTGACCTCAGT486220.10955731786416992No Hit
CAGACGCGAACGAATCTAGTAACA466690.10515672879361083No Hit
CAGACGCGTGCTTCAACGGAGCAA453110.10209682098110738No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)