FastQCFastQC Report
Tue 14 Jan 2025
4DNFIOH4YW88.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIOH4YW88.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90537248
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAGGGTGGGAGCCACAA1654430.18273473476905328No Hit
CAGACGCGCCGATTATGTGGCTAT1606890.1774838572517689No Hit
CAGACGCGCTGCTGTGAGCAGGTT1405990.1552940950889075No Hit
CAGACGCGTTCGCGCACGGATTAC1347960.14888457842235275No Hit
CAGACGCGTAAACCGGATTCCTCT1254080.13851536552116098No Hit
CAGACGCGCAGAACCACTTAGGCG1232820.1361671607248323No Hit
CAGACGCGTCGGTTTACCTACCTA1194830.13197109768567297No Hit
CAGACGCGAGTGTGCGAAGCTTAA1182330.1305904504629962No Hit
CAGACGCGCGAATATACATTGCAG1155310.12760604342645804No Hit
CAGACGCGACCATTATGTCCAGCG1152610.12730782362635984No Hit
CAGACGCGCTGAGCAACAAAGCTC1073130.11852911632569171No Hit
CAGACGCGGCGATAGCTAACACCT1070130.11819776099224928No Hit
CAGACGCGATGATGACTACTACGT1048980.11586170589148016No Hit
CAGACGCGGCGGTTGACATTAGCG1044010.11531276055574387No Hit
CAGACGCGGGTGAGGGAGCTTAGG1019850.11264424560375416No Hit
CAGACGCGTGCTTCCTGAGTGCGG1014110.11201025239910098No Hit
CAGACGCGGCATATTTGGCTTGCA1007750.11130777909220302No Hit
CAGACGCGCGTTTCGGAGAACCGT1007710.11130336102109047No Hit
CAGACGCGGTAGGTTACGGGTTTA1001990.11067157685199355No Hit
CAGACGCGAATCGTGACGGGTTAT975790.107777740273263No Hit
CAGACGCGTTGGTAAACCATTAAG969750.10711061153526556No Hit
CAGACGCGGAAGCGAACTCCCTCT945680.10445203724327914No Hit
CAGACGCGGAGGTGGGATATTACC934380.10320393215397933No Hit
CAGACGCGCGCCTAACTTAAGGTG929930.1027124217427064No Hit
CAGACGCGACAATTGGACGGGCAT905870.10005495196849809No Hit
CAGACGCGTTGCATCACGTGGCGT905700.10003617516626968No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)