FastQCFastQC Report
Tue 14 Jan 2025
4DNFIOFNRXCS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIOFNRXCS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34075594
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCGATTAGGACTCGCTA4792581.4064553063990608No Hit
CAGACGCGCTTGCGCACACCGTTC2943010.8636709311655727No Hit
CAGACGCGGGTTGCAGATAACTTC1947220.5714412491239331No Hit
CAGACGCGGATTTAGGAACAGGAA1941950.5698946876758773No Hit
CAGACGCGGGGAGGACTTGTTGCG1682030.493617220583154No Hit
CAGACGCGATTGGGATGTGCGGAA1551420.4552877346760265No Hit
CAGACGCGGACTCAAACCAGGTTG1150900.33774906462378906No Hit
CAGACGCGTGTAAGTACCGTAAAT1107810.32510365043086265No Hit
CAGACGCGAAACTAGCTCCTCACC988630.29012847142151066No Hit
CAGACGCGGACTTACCTTTATCCC970660.2848549023092598No Hit
CAGACGCGCATCATGTGTCACGGC769800.22590948818089568No Hit
CAGACGCGTGCTTCCTGGTCCTAG725960.2130439751101624No Hit
CAGACGCGGGACCATGAGTCCCTG708970.20805800186491247No Hit
CAGACGCGACGGCTCCTATTGGCT678450.19910144486402792No Hit
CAGACGCGAGTGAATCTTTATCCC648430.19029162044834788No Hit
CAGACGCGCGGTATTTGAATCGAG629690.18479208315488205No Hit
CAGACGCGGATGAAGGATAACCTT620910.1822154589586905No Hit
CAGACGCGCGCCTCTCTCAAACTT617870.18132332484064695No Hit
CAGACGCGCATCCAGCTCAAGAAC600750.1762992011232438No Hit
CAGACGCGAAATGGAACACCTTGC594180.17437113495365628No Hit
CAGACGCGCGAACTAGAAGGCTAC589290.17293609027035595No Hit
CAGACGCGACAGGCTGAGCTTTGT579800.17015110580317397No Hit
CAGACGCGGCTATGGGAGTCCCTG573490.16829934057789278No Hit
CAGACGCGACAACTAGATACTTCA522320.15328272780806113No Hit
GGGGGGGGGGGGGGGGGGGGGGGG520060.15261949652293663No Hit
CAGACGCGATATCAGGATTACTTG500640.14692040291359265No Hit
CAGACGCGCAATGAGCTCTAGCCA499480.14657998331591812No Hit
CAGACGCGTAATCCGTGCAGCAAG479550.14073122246966555No Hit
CAGACGCGCGGCAAGCTTAGTGCC473610.13898803935743573No Hit
CAGACGCGGAATCCGGACTCAATT456870.134075432404788No Hit
CAGACGCGGGGTAGCTGCAAGGGT453810.1331774289833363No Hit
CAGACGCGACTTGTCGATTCATGT420900.12351949022517406No Hit
CAGACGCGTCGCAACCTAAGCACG419010.12296484105310095No Hit
CAGACGCGCTTGAATCTTGAGGAT405330.11895023752190496No Hit
CAGACGCGCCTATGGCTGGCTATT393420.11545506734233305No Hit
CAGACGCGCCCTTTACTAAGCTAA393340.11543159012870033No Hit
CAGACGCGTACGGGCGAGGCAATC388290.11394959101813455No Hit
CAGACGCGTCAGTAAACCTGGTGA374260.10983227467729544No Hit
CAGACGCGCAGTAAGCTGGCCAAA371840.1091220889649055No Hit
CAGACGCGCCGTTAGCTTGATGAG366250.10748161866231884No Hit
CAGACGCGTGGAGCGCTTCTCACT352290.10338484488340834No Hit
CAGACGCGCGCCTCTCTATCCTAG346110.10157123013028034No Hit
CAGACGCGATTTGCGCTTCAATAC342100.10039443479694002No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)