FastQCFastQC Report
Tue 14 Jan 2025
4DNFIOC9L36P.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIOC9L36P.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74373534
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA2082500.2800055191676114No Hit
CAGACGCGCTAACAGGATTATTGC1933080.25991503913206543No Hit
CAGACGCGCCAATATCTTCAACCG1157810.15567500127128556No Hit
CAGACGCGCGGTTAGACTCAATAG1096900.1474852600119822No Hit
CAGACGCGGGAACAAGAGCTTGCC1046900.1407624384233241No Hit
CAGACGCGCTCTAGCGACGAAGGA970880.13054106047992825No Hit
CAGACGCGCGATCCGTGTTCAAGC938360.126168537318665No Hit
CAGACGCGCGTAAATACCTTTACG928630.12486027623751213No Hit
CAGACGCGCAATGCGACCTCACAT902940.12140609050525956No Hit
CAGACGCGAAATGACCTCACAACC873430.11743828120363353No Hit
CAGACGCGCATAGTGGATTACGGA850000.11428796700718835No Hit
CAGACGCGTCTCTATTGCACCTAA781740.10510997097435223No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)