FastQCFastQC Report
Tue 14 Jan 2025
4DNFIMUCXHOF.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIMUCXHOF.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92307795
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC1991970.21579650992638272No Hit
CAGACGCGAACTTCGCTCATCATA1656860.1794929669807409No Hit
CAGACGCGTAAGGTCGAGTCCCTG1445120.15655449249979378No Hit
CAGACGCGCAGAGGGACATCCACC1381770.14969158346811337No Hit
CAGACGCGGATGGCTGAGCTAACG1292060.139973010946692No Hit
CAGACGCGCTGTATTGAGGAAGGC1275040.13812917966462096No Hit
CAGACGCGTAAGGTTACCCGGTTC1062120.11506287199255492No Hit
CAGACGCGCTGTATTGAAATATGC1013360.10978054453581088No Hit
CAGACGCGTGTCAATCTACTCCTC977340.10587838221029978No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)