FastQCFastQC Report
Tue 14 Jan 2025
4DNFIMBZ7AV6.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIMBZ7AV6.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59448463
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGGTTATCTCCTTAAA2531540.42583775462790346No Hit
CAGACGCGCCGGTTCACCCGGAAT1538150.2587367145219549No Hit
CAGACGCGTGCAAGGTGGCCAATC1320750.22216722407104117No Hit
CAGACGCGGCTTGTGTGTTCATTC1108240.18642029483588163No Hit
CAGACGCGCCTAAGGACTAGGCTG998030.16788154808981354No Hit
CAGACGCGTGCTAATCTTAATTCG887600.14930579449968284No Hit
CAGACGCGTTGAAGCGATGCCTCA880380.14809129716272057No Hit
CAGACGCGCGCTAATTGCTCAAAC848080.14265801960262622No Hit
CAGACGCGATAGATGCTCAATGAG748320.1258770979495298No Hit
CAGACGCGACCAAATGAGTTTGTC730990.12296196791496528No Hit
CAGACGCGTGCTAGCCTAGGCTTT692710.11652277704807944No Hit
CAGACGCGCAATTGAACAAGCCAT638120.10734003333273731No Hit
CAGACGCGCACGGATACCACAAAT636870.10712976717329092No Hit
CAGACGCGGAGGTGGGACTTAGAG624740.10508934436202327No Hit
CAGACGCGAGGCGGTTGAGGAAGG612910.10309938542902278No Hit
CAGACGCGTAGTCAAACTATGGAT606430.10200936565845278No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)