FastQCFastQC Report
Tue 14 Jan 2025
4DNFIM5GZMIG.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIM5GZMIG.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70528178
Sequences flagged as poor quality0
Sequence length24
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGTACGTAACGCAATGT1682720.23858832706553115No Hit
CAGACGCGCTGGATCCTAAGGTCG920730.13054782160968342No Hit
CAGACGCGCACTATACTCACCCTC906550.1285372776821202No Hit
CAGACGCGTGGTCAAGATGGGCGT830640.11777420366651185No Hit
CAGACGCGAACTAAGCTATGGACG816830.1158161210403025No Hit
CAGACGCGACATAACGACACTAAG777940.110302012906104No Hit
CAGACGCGCCTTTGGGATGACTTT771340.10936621671979108No Hit
CAGACGCGCCATTACACGCAATCA729990.10350331182523956No Hit
CAGACGCGAGCTTGAACCGCCCAT721830.10234632744943446No Hit
CAGACGCGCAGTTAGGAACAGGCT715810.10149276789767629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)