FastQCFastQC Report
Tue 14 Jan 2025
4DNFILU1GTP8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFILU1GTP8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41172605
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCCTTACGGACTCAATT1365490.33165013484087297No Hit
CAGACGCGAGTAACCACGGTACGC1072390.2604620232312238No Hit
CAGACGCGGGTTATCCTTCAAGGA1038300.2521822459375597No Hit
CAGACGCGTCAATGAACGCTAACA1036230.2516794844533155No Hit
CAGACGCGGCGGATACTAGGCTGA785360.19074819288213607No Hit
CAGACGCGCGGGAACCTAACGGAC580010.14087279636544736No Hit
CAGACGCGAGGTTATGACACCTTG553510.13443647784734536No Hit
CAGACGCGCCTGCTCCTATGTGGG545780.1325590158796122No Hit
CAGACGCGTAGGCATGAGGTTGGT523160.12706507154453792No Hit
CAGACGCGAGCGTGCACCGCAACA447940.10879564215089134No Hit
CAGACGCGGTAGCAGCTCCCTCAC434020.10541475332930719No Hit
CAGACGCGCAGTCTATGTGCGGAA418590.10166711579216325No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)