FastQCFastQC Report
Tue 14 Jan 2025
4DNFILS4Q14E.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFILS4Q14E.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38429035
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCTTCATTTGTGGGTGA961830.25028731530729303No Hit
CAGACGCGCCAGGCTTGCGTGTTA904980.23549381346682266No Hit
CAGACGCGCAGGAATCTAGGCCCT850120.22121814924574607No Hit
CAGACGCGACATGTTTGAATCGTT815950.21232643494690928No Hit
CAGACGCGGGTTCATCTAAGAATC784330.20409828141664238No Hit
CAGACGCGTGGTTATCTACTACGT730860.1901843228694137No Hit
CAGACGCGGTTTAACTGGGAACAT727770.18938024334985254No Hit
CAGACGCGCACTAAGGAAGCTAAT711770.18521672480196288No Hit
CAGACGCGCTATTAGCTACGGGTA677500.17629898851220177No Hit
CAGACGCGATAGCCTCTCCCTCAC627630.16332182163824827No Hit
CAGACGCGAACGATTGATTCCGCA609040.158484333525419No Hit
CAGACGCGGGTATAGTGTCACGAT527090.13715931196294678No Hit
CAGACGCGATGTGATGATTTGGGA517970.13478610639064967No Hit
CAGACGCGCTTGACCGAGGTTAGC510430.13282404827495667No Hit
CAGACGCGGTAATTGGATCCTAAT502970.13088280775200314No Hit
CAGACGCGGTAACTAGAAGGCTGT499900.13008393263062681No Hit
CAGACGCGGTTCCTTTGCAATCCA467970.12177511092849456No Hit
CAGACGCGTTTCCGGGATTACGTT464130.12077586647700105No Hit
CAGACGCGAAGTTAGCTTCATTAG462140.12025802885760728No Hit
CAGACGCGGTTGTTGCTAAGCACG448160.11662015452638871No Hit
CAGACGCGCATGGTGACGCAATCA445890.11602945533240687No Hit
CAGACGCGAGCTTGTCTAAAGGCC445260.11586551678958372No Hit
CAGACGCGCTTAGTGTGCCTTTAT444600.11569377164948327No Hit
CAGACGCGGGATCCAGACTTCGAC439970.1144889534696877No Hit
CAGACGCGGGTTATCCTGATATAG438910.11421312036589001No Hit
CAGACGCGCTAGTTTGAGGGTGGA438040.11398672904484851No Hit
CAGACGCGAGGCTAATGAATCAGG434100.1129614626024307No Hit
CAGACGCGGATGTAACTAGCCAGA407440.10602399982200959No Hit
CAGACGCGCTCAAGGACCACAATA403960.10511843453784359No Hit
CAGACGCGGTGAGGAACTATCCGT401800.10455635953387848No Hit
CAGACGCGGGAAGCAACCCGGATA397460.10342700512776341No Hit
CAGACGCGGCATATAGATACTTAC397100.1033333259604359No Hit
CAGACGCGAACTTGGACTAACCTC393100.1022924463234635No Hit
CAGACGCGGCTTTGGTGTAACGGG391830.10196196703872475No Hit
CAGACGCGTGGTCAAGACAACAAC391540.10188650326504425No Hit
CAGACGCGAGCAAACTGTGCTGAT389340.10131401946470943No Hit
CAGACGCGCAATTGGGAGTAGTTA388550.10110844573640738No Hit
CAGACGCGTGCATCGCTGATCACT388000.10096532478632368No Hit
CAGACGCGACTAGTTTGAGGAGAG387550.10084822582716428No Hit
CAGACGCGCTACCGCACATTACCT386010.1004474871669299No Hit
CAGACGCGTCACGTTACGCAAGGA385530.1003225816104932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)