FastQCFastQC Report
Tue 14 Jan 2025
4DNFILBM5ZFX.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFILBM5ZFX.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23764996
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTAACCGGACCGTGCTC1119500.4710709818760332No Hit
CAGACGCGTTAGGAGCTAGATTGA755030.3177067650253339No Hit
CAGACGCGGCTCGACCTGGACCTC414650.17447930561402156No Hit
CAGACGCGGGTAACCGAAGGACAA388400.16343364837932225No Hit
CAGACGCGCGGATTAGAGTTACTC376300.1583421263778037No Hit
CAGACGCGACATTAGGATTGAGTG365680.15387336905085108No Hit
CAGACGCGACAGGCTGACCATGCT346080.14562594498227563No Hit
CAGACGCGTTTGTACGAGCTTACT342840.14426259528930702No Hit
CAGACGCGTGGTCAAGATGACTTT333240.14022304064347413No Hit
CAGACGCGGTGGTGACTTGATTAC331040.13929730937047075No Hit
CAGACGCGCTTGAGCCTAAGAATC322410.1356659180586439No Hit
CAGACGCGACTTGTCGAGGCGGAA319440.13441618084008936No Hit
CAGACGCGACTCAATTGTCATCCC311050.13088577839440832No Hit
CAGACGCGCAGCGATACATAACGC308860.12996425499082767No Hit
CAGACGCGGTTATTGTGTTGACCA306130.12881550663841895No Hit
CAGACGCGTCCGTTAACAAAGCTC297040.12499055333314595No Hit
CAGACGCGACAGTTAGATCCCTTT296620.12481382281739074No Hit
CAGACGCGGACACCTTGGCCATCA293810.1236314115096001No Hit
CAGACGCGGCTATACCTAAATACG285380.1200841775862281No Hit
CAGACGCGAGTGAGCCTAACCCTA281850.11859879967999994No Hit
CAGACGCGCCAAATAACGCGAACC281560.1184767714667404No Hit
CAGACGCGCGGTTAGACCTTTGAC280590.11806860813273437No Hit
CAGACGCGGTCAAGCGACCAAATG273430.11505577362605067No Hit
CAGACGCGGATAGCCGAAGTAAGG272500.11466444176973561No Hit
CAGACGCGGTTAGTTTGGCCACAT267000.1123501135872272No Hit
CAGACGCGGCGCATTTGAATCGAG265580.11175259612919775No Hit
CAGACGCGCAAGGCTACCGCACTC264160.1111550786711683No Hit
CAGACGCGACAATTGGAACCTGGA262810.11058701629909805No Hit
CAGACGCGGCCATAAACAAGCTCA262790.11057860056025257No Hit
CAGACGCGAATTAGCGACGGTTGG260540.10963182994013548No Hit
CAGACGCGACTAAGACTATCCGTA259790.10931623973342978No Hit
CAGACGCGCTGGATCCTAAATGCA258520.10878184031674147No Hit
CAGACGCGCGGCACTTGAGCCTTG253090.10649696722019227No Hit
CAGACGCGCCAACAAGACACCGTT252770.10636231539866449No Hit
CAGACGCGGTGGCTAGAGGCCCTT251200.10570167989929391No Hit
CAGACGCGTGTGTTACTATCCTAG249840.10512940965780092No Hit
CAGACGCGGGAGGCTTGTTGCGGC246530.10373660487887311No Hit
CAGACGCGCGCCTCTCTGGTAAAT244230.10276879491164233No Hit
CAGACGCGTTCGTAACTTGTCCAG244230.10276879491164233No Hit
CAGACGCGGTCGATTCTAAATCCC243750.10256681717935066No Hit
CAGACGCGAAGCCTAACAGCTATG243220.10234380009994531No Hit
CAGACGCGTCTAACCACCTGATTC242450.10201979415439413No Hit
CAGACGCGGCTTCTTTGATTTGGT240010.10099307401524493No Hit
CAGACGCGGCGCATCCTCAAGGTA238190.1002272417803058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)