FastQCFastQC Report
Tue 14 Jan 2025
4DNFIKSZYGU4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIKSZYGU4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32074786
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTCCCATAACCCAAAGC595450.18564426275517473No Hit
CAGACGCGCAACCTGCTCACATTA545850.17018040276246893No Hit
CAGACGCGACATAGTGATTCATCA458370.14290664324307573No Hit
CAGACGCGGCAACGGTGGCTTCGA425910.13278654454623642No Hit
CAGACGCGGGCGAGAGAGTATGTA418520.1304825541158716No Hit
CAGACGCGAGTCTTGCTGACCGCT364220.11355336868030858No Hit
CAGACGCGGAGAGCAACCTAGTAA350340.10922598205331752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)