FastQCFastQC Report
Tue 14 Jan 2025
4DNFIKNLQ9VB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIKNLQ9VB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13740272
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGAGGCTTGGCCATCA502700.3658588418045873No Hit
CAGACGCGGACGAGGGAAGCTAAT434900.3165148404631291No Hit
CAGACGCGTAGCCACCTCACTAAT322220.2345077302690951No Hit
CAGACGCGAACAGCTACGCGTTTC241100.17546959769064252No Hit
CAGACGCGCAGAGGGACCCAAACG214190.1558848325564443No Hit
CAGACGCGGATTCACCTAAGGATT196510.14301754725088411No Hit
CAGACGCGAAGTCGCGATCCCTGA175440.12768306187825104No Hit
CAGACGCGACCGGACACTTCCTGA169840.12360745114798309No Hit
CAGACGCGACGCGAACTCATGACC159910.11638051997806156No Hit
CAGACGCGGATTGCAACTTCATCG151180.11002693396462603No Hit
CAGACGCGGTCACAGGACCTTGTG145470.10587126659501354No Hit
CAGACGCGTTGCAAGGAGGAGGAC140620.10234149658754936No Hit
CAGACGCGTGCTAATCTATACCTG140260.10207949304060357No Hit
CAGACGCGAGCCATAACGTATTTC139460.10149726293627956No Hit
CAGACGCGGCTGACAGAGTTGCCC139260.10135170541019857No Hit
CAGACGCGCATAGCTTGATTGTGT138070.10048563813001665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)