FastQCFastQC Report
Tue 14 Jan 2025
4DNFIHNHVG13.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIHNHVG13.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57859341
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA1111550.192112454236214No Hit
CAGACGCGTACGTTACTTCGCTCC1087960.18803532518629965No Hit
CAGACGCGTTTGTACGAAGCTAAT764480.13212732581935213No Hit
CAGACGCGGCGATTAACCATAATG607690.10502884918789518No Hit
CAGACGCGGCCAAATACTAAATGC587170.10148231726317103No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)