FastQCFastQC Report
Tue 14 Jan 2025
4DNFIHCABP1Y.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIHCABP1Y.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20234287
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT788260.3895664818829544No Hit
CAGACGCGTAAGGCTGACTTACAT738480.3649646760471471No Hit
CAGACGCGGTCACCATGTAACGAA647520.3200112759100432No Hit
CAGACGCGATAGCTCCTTAACCGC553010.2733034279883447No Hit
CAGACGCGGGTTACAACCTTTAGC532370.263102920305519No Hit
CAGACGCGTTTGAGCTGAGGAACT475000.23475005568518426No Hit
CAGACGCGCATGGCGGAGTCGCAA458710.2266993643017913No Hit
CAGACGCGTCTCAAACTTCAATAC354020.1749604520287767No Hit
CAGACGCGTGCTAGCCTATCCTCC343720.16987008240023482No Hit
CAGACGCGGTCTAGCTGTCATCAG313030.15470275774975417No Hit
CAGACGCGGGGAGGACTCGATTAT296890.14672619796289338No Hit
CAGACGCGCCTTTCTGATTGCTAT248380.12275203964439171No Hit
CAGACGCGCCTAAGGACCTCGACC248340.1227322712186498No Hit
CAGACGCGAAGCACGCTCCATCCC240490.11885271766679992No Hit
CAGACGCGAGGACTTACGTAGCTA240060.11864020709007439No Hit
CAGACGCGTAGGTAGCTTAACGGA228610.11298149522145258No Hit
CAGACGCGACAAAGAACTAATGCA225310.11135060009774499No Hit
CAGACGCGGAAACTCACACAAAGA222650.11003599978590795No Hit
CAGACGCGCTAACGGACAAAGGTA218120.10779722557063662No Hit
CAGACGCGCCTATGGCTAAGGTGC217980.10772803608053994No Hit
CAGACGCGGCTGCAAGAGGGAGCA215160.10633436206573525No Hit
CAGACGCGTAACGTGGATCATGGA213480.10550408818457502No Hit
CAGACGCGTGTGAGCACGCCACTT209600.10358655088760972No Hit
CAGACGCGTGCATTACTCCAACCA208940.10326037186286821No Hit
CAGACGCGTAAGGCTGATCCGTCA205930.10177279782578946No Hit
CAGACGCGGTTGCTGTGCATCACA205700.10165912937777348No Hit
CAGACGCGGGTGAGAACTTGTTGC205290.1014565030139189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)