FastQCFastQC Report
Tue 14 Jan 2025
4DNFIGOLBY9I.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIGOLBY9I.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81274693
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAATCCACCTACTGATC3376860.41548726612846143No Hit
CAGACGCGGCTCAAGGACTAAGAC1815950.2234336338865039No Hit
CAGACGCGTACCTCCTGGTCCTGA1743330.21449850324257763No Hit
CAGACGCGCTGGCAGGAGGCGGAA1702640.20949202478070264No Hit
CAGACGCGAACGAATCTGCAACAG1311830.1614069461941862No Hit
CAGACGCGAGAGCTGCTAGGATCG980620.12065502357541973No Hit
CAGACGCGACCTCGCGAGGAACAA908720.11180848139284881No Hit
CAGACGCGATAAAGGACCTCACTA871340.10720926377414924No Hit
CAGACGCGCCAAATAACCTTAGTC843500.1037838432684083No Hit
GGGGGGGGGGGGGGGGGGGGGGGG839630.10330768028862318No Hit
CAGACGCGCTAACGGACAGCCTAA833200.10251653611290787No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)