FastQCFastQC Report
Tue 14 Jan 2025
4DNFIGKM6F8N.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIGKM6F8N.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89003325
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC2013820.22626345701129708No Hit
CAGACGCGAACTTCGCTCATCATA1793100.20146438349353804No Hit
CAGACGCGTAAGGTCGAGTCCCTG1565740.17591927043175073No Hit
CAGACGCGCAGAGGGACATCCACC1469920.16515338050572828No Hit
CAGACGCGGATGGCTGAGCTAACG1398000.1570727835167956No Hit
CAGACGCGCTGTATTGAGGAAGGC1359070.1526987896238708No Hit
CAGACGCGCTGTATTGAAATATGC1086120.12203139601807012No Hit
CAGACGCGTAAGGTTACCCGGTTC1052760.11828322144144614No Hit
CAGACGCGTGTCAATCTACTCCTC1051990.11819670781962359No Hit
GGGGGGGGGGGGGGGGGGGGGGGG1033990.1161743114653301No Hit
CAGACGCGCAGTAATACTTGTTGC991440.11139359119448626No Hit
CAGACGCGGCTTAAAGACAAACTG973530.10938130682196423No Hit
CAGACGCGTACGGACACGTAGTTG957420.10757126208487154No Hit
CAGACGCGGCGGTACACGCAATTG917110.10304221780478426No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)