FastQCFastQC Report
Tue 14 Jan 2025
4DNFIFQSLLLR.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIFQSLLLR.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21062708
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAATCCACCTACTGATC956310.45402993765094213No Hit
CAGACGCGGCTCAAGGACTAAGAC510380.2423145210008134No Hit
CAGACGCGCTGGCAGGAGGCGGAA495250.23513120914936486No Hit
CAGACGCGTACCTCCTGGTCCTGA491950.23356445904296827No Hit
CAGACGCGAACGAATCTGCAACAG365770.1736576322474774No Hit
CAGACGCGAGAGCTGCTAGGATCG293790.13948348901765148No Hit
CAGACGCGATAAAGGACCTCACTA258430.12269552424123242No Hit
CAGACGCGACCTCGCGAGGAACAA253690.12044510136113551No Hit
CAGACGCGAATTAGCGAGTGAGTC235090.11161432803417301No Hit
CAGACGCGCCAAATAACCTTAGTC225940.10727015728461886No Hit
CAGACGCGATTTGCGCTTTAACCA220480.1046778980176718No Hit
CAGACGCGAGATTAGCTTGTGTGC211710.10051414091673302No Hit
CAGACGCGCTAACGGACAGCCTAA211320.10032897954052253No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)