FastQCFastQC Report
Tue 14 Jan 2025
4DNFIFIAOV2W.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIFIAOV2W.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57361232
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA1277270.22267129827337043No Hit
CAGACGCGTACGTTACTTCGCTCC1090620.19013189953800155No Hit
CAGACGCGTTTGTACGAAGCTAAT853320.14876249519884788No Hit
CAGACGCGGCCAAATACTAAATGC647720.11291947146462963No Hit
CAGACGCGATGGATTGAACGGTGT606930.10580839686288467No Hit
CAGACGCGGCGATTAACCATAATG606270.10569333657268727No Hit
CAGACGCGCAGTTAGGAGCAACAC584360.10187368360567987No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)