FastQCFastQC Report
Tue 14 Jan 2025
4DNFIFF37YWB.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIFF37YWB.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67291942
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA1752580.2604442594330239No Hit
CAGACGCGCTAACAGGATTATTGC1478520.2197172434108084No Hit
CAGACGCGCGGTTAGACTCAATAG883080.1312311658355766No Hit
CAGACGCGCATAGTGGATTACGGA860420.1278637492732785No Hit
CAGACGCGCCAATATCTTCAACCG847990.12601657416871695No Hit
CAGACGCGAAATGACCTCACAACC818230.1215940535643926No Hit
CAGACGCGGGAACAAGAGCTTGCC784000.11650726323220097No Hit
CAGACGCGCTCTAGCGACGAAGGA763190.11341476814564218No Hit
CAGACGCGCGTAAATACCTTTACG713920.10609294051879198No Hit
CAGACGCGCGATCCGTGTTCAAGC703250.10450731233169047No Hit
CAGACGCGCAATGCGACCTCACAT683150.1015203276493343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)