FastQCFastQC Report
Tue 14 Jan 2025
4DNFIF416BAW.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIF416BAW.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78770806
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAATCCACCTACTGATC3179350.403620346350144No Hit
CAGACGCGGCTCAAGGACTAAGAC1762340.22373009614754988No Hit
CAGACGCGTACCTCCTGGTCCTGA1658500.21054754727278022No Hit
CAGACGCGCTGGCAGGAGGCGGAA1614190.20492236679665307No Hit
CAGACGCGAACGAATCTGCAACAG1231240.15630663979749046No Hit
CAGACGCGAGAGCTGCTAGGATCG945730.12006097792118568No Hit
CAGACGCGACCTCGCGAGGAACAA886040.11248329742874538No Hit
GGGGGGGGGGGGGGGGGGGGGGGG864610.10976274636570305No Hit
CAGACGCGATAAAGGACCTCACTA847030.10753095505967021No Hit
CAGACGCGCCAAATAACCTTAGTC817040.10372370697844581No Hit
CAGACGCGCTAACGGACAGCCTAA803550.1020111435701191No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)