FastQCFastQC Report
Tue 14 Jan 2025
4DNFIF3SIVI8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIF3SIVI8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55610680
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGAGGGTGGACATGCAA1206820.21701227174348525No Hit
CAGACGCGTACGTTACTTCGCTCC1077900.19382967444382984No Hit
CAGACGCGTTTGTACGAAGCTAAT823710.1481208285890408No Hit
CAGACGCGGCCAAATACTAAATGC630210.11332535405069674No Hit
CAGACGCGGCGATTAACCATAATG593970.1068086202146782No Hit
CAGACGCGATGGATTGAACGGTGT590060.10610551786095763No Hit
CAGACGCGCAGTTAGGAGCAACAC565730.1017304589693922No Hit
CAGACGCGATAATGCGACCTTGTG556820.10012824874646381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)