FastQCFastQC Report
Tue 14 Jan 2025
4DNFIESW7MZE.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIESW7MZE.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences85084412
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAATCCACCTACTGATC2745570.32268777975453367No Hit
CAGACGCGGCTCAAGGACTAAGAC1945640.2286717336660915No Hit
CAGACGCGTACCTCCTGGTCCTGA1434410.16858669717315553No Hit
CAGACGCGCTGGCAGGAGGCGGAA1430310.16810482277294225No Hit
CAGACGCGAACGAATCTGCAACAG1087560.12782129821852678No Hit
CAGACGCGAGAGCTGCTAGGATCG956190.11238133725364408No Hit
CAGACGCGCCAAATAACCTTAGTC906130.10649776835738138No Hit
CAGACGCGATAAAGGACCTCACTA873010.10260516344639016No Hit
CAGACGCGACCTCGCGAGGAACAA872400.10253346993806575No Hit
CAGACGCGCTAACGGACAGCCTAA864260.10157677295813011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)