FastQCFastQC Report
Tue 14 Jan 2025
4DNFIEQCHF7T.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIEQCHF7T.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94915720
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGAATCTCTATTGCAC2210770.2329192677461647No Hit
CAGACGCGAACTTCGCTCATCATA1565760.16496319050205804No Hit
CAGACGCGTAAGGTCGAGTCCCTG1377680.14514771631084925No Hit
CAGACGCGCAGAGGGACATCCACC1309040.13791603751201592No Hit
CAGACGCGCTGTATTGAGGAAGGC1226000.12916722330083993No Hit
CAGACGCGGATGGCTGAGCTAACG1221220.12866361862924286No Hit
CAGACGCGTAAGGTTACCCGGTTC1136090.11969460907002549No Hit
GGGGGGGGGGGGGGGGGGGGGGGG980050.1032547611712791No Hit
CAGACGCGCTGTATTGAAATATGC950750.10016781203366523No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)