FastQCFastQC Report
Tue 14 Jan 2025
4DNFIEKN84XM.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIEKN84XM.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28570669
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA962540.33689795643217174No Hit
CAGACGCGCTAACAGGATTATTGC836350.2927302822345532No Hit
CAGACGCGCCAATATCTTCAACCG594710.2081540337749879No Hit
CAGACGCGCGGTTAGACTCAATAG480060.16802546695703907No Hit
CAGACGCGGGAACAAGAGCTTGCC472330.16531989502940936No Hit
CAGACGCGCGATCCGTGTTCAAGC452430.15835470985996164No Hit
CAGACGCGCTCTAGCGACGAAGGA451870.1581587046491631No Hit
CAGACGCGCGTAAATACCTTTACG410700.14374882156242122No Hit
CAGACGCGCATAGTGGATTACGGA389640.13637762559917654No Hit
CAGACGCGCAATGCGACCTCACAT362070.12672786906039898No Hit
CAGACGCGTCTCTATTGCACCTAA357830.12524382960721012No Hit
CAGACGCGAAATGACCTCACAACC356710.12485181918561306No Hit
CAGACGCGCTGGACGGAGTAACTA306560.10729885253999477No Hit
CAGACGCGTACCGCACTCATGATT298050.10432027335446711No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)