FastQCFastQC Report
Tue 14 Jan 2025
4DNFIEGNEOZ9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIEGNEOZ9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40127400
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCCTTACGGACTCAATT1115050.27787746028897964No Hit
CAGACGCGAGTAACCACGGTACGC908700.22645374482273958No Hit
CAGACGCGTCAATGAACGCTAACA871800.21725803316437145No Hit
CAGACGCGGGTTATCCTTCAAGGA869830.2167670967967025No Hit
CAGACGCGGCGGATACTAGGCTGA720900.17965280581348406No Hit
CAGACGCGCCTGCTCCTATGTGGG539770.13451407267851892No Hit
CAGACGCGCGGGAACCTAACGGAC518060.12910380438304003No Hit
CAGACGCGAGGTTATGACACCTTG494030.12311537752259054No Hit
CAGACGCGTAGGCATGAGGTTGGT473180.11791942662619556No Hit
CAGACGCGGTAGCAGCTCCCTCAC445650.11105877779273014No Hit
CAGACGCGCAGTCTATGTGCGGAA431640.10756739783788632No Hit
CAGACGCGGACTAGGCTGCACACC415350.10350782756919212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)