FastQCFastQC Report
Tue 14 Jan 2025
4DNFIE9VFHBH.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIE9VFHBH.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72846637
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGGAACCTGTAATGGA2189290.3005341207446543No Hit
CAGACGCGCTAACAGGATTATTGC2025790.27808970783373294No Hit
CAGACGCGCCAATATCTTCAACCG1224680.1681175755580865No Hit
CAGACGCGCGGTTAGACTCAATAG1160210.15926747586165166No Hit
CAGACGCGGGAACAAGAGCTTGCC1087870.1493370243021651No Hit
CAGACGCGCTCTAGCGACGAAGGA1023210.1404608424133567No Hit
CAGACGCGCGATCCGTGTTCAAGC990510.13597195983117244No Hit
CAGACGCGCGTAAATACCTTTACG976430.13403913210159585No Hit
CAGACGCGCAATGCGACCTCACAT944060.12959555016932353No Hit
CAGACGCGAAATGACCTCACAACC861110.1182086140778194No Hit
CAGACGCGCATAGTGGATTACGGA856190.11753322257004122No Hit
CAGACGCGTCTCTATTGCACCTAA824100.11312807755284571No Hit
GGGGGGGGGGGGGGGGGGGGGGGG820700.11266134358405593No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)