FastQCFastQC Report
Tue 14 Jan 2025
4DNFIDX7NWYQ.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIDX7NWYQ.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90100276
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACAATTGGATCTTTGA1878160.20845219164478476No Hit
CAGACGCGCCATCACGAGTCAATA1419410.15753669833375428No Hit
CAGACGCGCAGCTACCTGGATCCC1321660.146687674963393No Hit
CAGACGCGGGATCCAGAACCAAAT1073820.11918054501853025No Hit
CAGACGCGTTCCTCACTTTCTTCG1061190.11777877350786362No Hit
CAGACGCGTAACCGGACGGTTATG1045500.11603738039603784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)