FastQCFastQC Report
Tue 14 Jan 2025
4DNFIDWBLPRX.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIDWBLPRX.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46227271
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGTGCTGTGCTTCGCTTT1403150.3035329513611132No Hit
CAGACGCGTAAGGCTGACTTACAT1300540.28133609704107343No Hit
CAGACGCGCATGGCGGAGTCGCAA1050160.22717326315888298No Hit
CAGACGCGGTCACCATGTAACGAA973100.21050344936001092No Hit
CAGACGCGATAGCTCCTTAACCGC854710.18489302559088983No Hit
CAGACGCGGGTTACAACCTTTAGC832320.18004956424963958No Hit
CAGACGCGTCTCAAACTTCAATAC829820.17950875793641377No Hit
CAGACGCGTTTGAGCTGAGGAACT777860.1682686395223287No Hit
CAGACGCGGTCTAGCTGTCATCAG708580.1532818149702153No Hit
CAGACGCGGGGAGGACTCGATTAT670130.14496421387280248No Hit
CAGACGCGTGCTAGCCTATCCTCC626790.13558879562672No Hit
CAGACGCGCCTTTCTGATTGCTAT587980.12719331842020265No Hit
CAGACGCGAAGCACGCTCCATCCC540300.11687906041436018No Hit
CAGACGCGACAAAGAACTAATGCA522460.11301986656318086No Hit
CAGACGCGTGTGAGCACGCCACTT520030.11249420282672538No Hit
CAGACGCGCTAACGGACAAAGGTA518110.11207886357816796No Hit
CAGACGCGCCTAAGGACCTCGACC515230.11145585470533183No Hit
CAGACGCGGAAACTCACACAAAGA509290.11017089890510733No Hit
CAGACGCGAGGACTTACGTAGCTA490920.10619705411552414No Hit
CAGACGCGTAGGTAGCTTAACGGA488190.10560649362148157No Hit
CAGACGCGGTTGCTGTGCATCACA485610.10504838150623254No Hit
GGGGGGGGGGGGGGGGGGGGGGGG484980.10491209831529964No Hit
CAGACGCGGCTGCAAGAGGGAGCA484120.10472606094354996No Hit
CAGACGCGTAAGGCTGATCCGTCA480680.10398191145655127No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)