FastQCFastQC Report
Tue 14 Jan 2025
4DNFIDLBJTHF.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIDLBJTHF.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23362057
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCTTCATTTGTGGGTGA583380.2497126002218041No Hit
CAGACGCGCAGGAATCTAGGCCCT565920.2422389432574366No Hit
CAGACGCGCCAGGCTTGCGTGTTA557340.23856632145020448No Hit
CAGACGCGACATGTTTGAATCGTT547350.23429015689842722No Hit
CAGACGCGCACTAAGGAAGCTAAT479670.2053201051602605No Hit
CAGACGCGGGTTCATCTAAGAATC474160.202961579967038No Hit
CAGACGCGTGGTTATCTACTACGT453450.19409677837871897No Hit
CAGACGCGGTTTAACTGGGAACAT430400.1842303526611548No Hit
CAGACGCGCTATTAGCTACGGGTA422450.18082739888871943No Hit
CAGACGCGAACGATTGATTCCGCA401280.1717656968305488No Hit
CAGACGCGATAGCCTCTCCCTCAC387460.16585012184500705No Hit
CAGACGCGATGTGATGATTTGGGA364080.15584244144254933No Hit
CAGACGCGGTAACTAGAAGGCTGT335520.14361749053176268No Hit
CAGACGCGGGTATAGTGTCACGAT323540.13848951742562737No Hit
CAGACGCGCTTGACCGAGGTTAGC317700.13598973754751134No Hit
CAGACGCGGTTGTTGCTAAGCACG308820.132188702390376No Hit
CAGACGCGGTAATTGGATCCTAAT308460.1320346063704921No Hit
CAGACGCGTTTCCGGGATTACGTT304120.1301768932418922No Hit
CAGACGCGAAGTTAGCTTCATTAG293640.12569098688527297No Hit
CAGACGCGGTTCCTTTGCAATCCA291030.12457379074111496No Hit
CAGACGCGAGGCTAATGAATCAGG284070.12159460102336023No Hit
CAGACGCGAGCTTGTCTAAAGGCC283680.12142766366848605No Hit
CAGACGCGGGATCCAGACTTCGAC280170.11992522747461835No Hit
CAGACGCGCATGGTGACGCAATCA272830.11678338084698621No Hit
CAGACGCGCTTAGTGTGCCTTTAT270590.11582456116770881No Hit
CAGACGCGGGTTATCCTGATATAG270500.11578603716273786No Hit
CAGACGCGCTAGTTTGAGGGTGGA265110.11347887730947664No Hit
CAGACGCGGTGAGGAACTATCCGT262740.11246441184524118No Hit
CAGACGCGGATGTAACTAGCCAGA262280.1122675113753896No Hit
CAGACGCGGCTTTGGTGTAACGGG257970.11042263958177997No Hit
CAGACGCGGCATAATGAATAATGC257490.11021717822193482No Hit
CAGACGCGAACTTGGACTAACCTC256990.11000315597209612No Hit
CAGACGCGCTACCGCACATTACCT254040.10874042469804779No Hit
CAGACGCGGAAGCCACTTCCTGAG252450.10805983394356071No Hit
CAGACGCGACTAGTTTGAGGAGAG251220.1075333392089575No Hit
CAGACGCGCTCAAGGACCACAATA249280.10670293287958334No Hit
CAGACGCGAACCAGGCTCAAACCC247740.10604374435008014No Hit
CAGACGCGTGGTCAAGACAACAAC247630.10599665945511562No Hit
CAGACGCGTCACGTTACGCAAGGA247630.10599665945511562No Hit
CAGACGCGTGCATCGCTGATCACT247040.10574411320030594No Hit
CAGACGCGGGAAGCAACCCGGATA246510.10551724961547693No Hit
CAGACGCGCGATTACTGTAACCCA245690.10516625312574145No Hit
CAGACGCGGTAGCAGCTTACTTCC245530.10509776600579307No Hit
CAGACGCGCTGAGCAACAGATAGA245290.10499503532587048No Hit
CAGACGCGGCATATAGATACTTAC241370.10331710088713507No Hit
CAGACGCGGACGAGGGAACTGAGC241150.10322293109720604No Hit
CAGACGCGTGATTTGCTAGTAGGC239910.10269215591760605No Hit
CAGACGCGTATGACAACGGTTGGC238700.1021742220729964No Hit
CAGACGCGGTTAACCCTTGATTAC237960.10185746914323512No Hit
CAGACGCGCGGGTAATGGTTCACG236810.1013652179686061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)