FastQCFastQC Report
Tue 14 Jan 2025
4DNFIDGMJ6JS.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIDGMJ6JS.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55784105
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGAGGGTGGGAGCCACAA1026440.1840022350452696No Hit
CAGACGCGCCGATTATGTGGCTAT975150.1748078596940831No Hit
CAGACGCGCTGCTGTGAGCAGGTT855430.15334654916485618No Hit
CAGACGCGTTCGCGCACGGATTAC837060.15005349642160612No Hit
CAGACGCGCAGAACCACTTAGGCG774280.13879939455871884No Hit
CAGACGCGTAAACCGGATTCCTCT764180.13698884296879907No Hit
CAGACGCGAGTGTGCGAAGCTTAA728100.13052105075451154No Hit
CAGACGCGTCGGTTTACCTACCTA727180.13035612922354853No Hit
CAGACGCGCGAATATACATTGCAG719640.12900448971978667No Hit
CAGACGCGACCATTATGTCCAGCG711030.1274610393050135No Hit
CAGACGCGCTGAGCAACAAAGCTC666900.11955018369479979No Hit
CAGACGCGGCGGTTGACATTAGCG665680.11933148340374018No Hit
CAGACGCGGCGATAGCTAACACCT647720.11611192829928885No Hit
CAGACGCGATGATGACTACTACGT635980.11400738615417419No Hit
CAGACGCGTGCTTCCTGAGTGCGG622970.11167518059131719No Hit
CAGACGCGGGTGAGGGAGCTTAGG622410.11157479357247016No Hit
CAGACGCGGTAGGTTACGGGTTTA617450.11068565140553926No Hit
CAGACGCGCGTTTCGGAGAACCGT617030.11061036114140399No Hit
CAGACGCGGCATATTTGGCTTGCA614510.11015861955659234No Hit
CAGACGCGAATCGTGACGGGTTAT600510.10764894408541645No Hit
CAGACGCGGAAGCGAACTCCCTCT595830.10680999542790907No Hit
CAGACGCGTTGGTAAACCATTAAG586390.10511775711020191No Hit
CAGACGCGGAGGTGGGATATTACC578280.10366393796225645No Hit
CAGACGCGCGCCTAACTTAAGGTG570140.10220474093830133No Hit
CAGACGCGTTGCATCACGTGGCGT558000.10002849377972454No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)