FastQCFastQC Report
Tue 14 Jan 2025
4DNFICD8RVJ2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFICD8RVJ2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73207035
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGTATAGTGAGAACCA2215910.3026908547791889No Hit
CAGACGCGTTTGTGCACACTTAGG2093100.2859151446305673No Hit
CAGACGCGCGGGAACCTCCTTAAA1799680.2458342972092778No Hit
CAGACGCGGAATGCATGTTCAAGC1598290.21832464598518433No Hit
CAGACGCGTAACCGTTGCACACTA1572120.21474985293421595No Hit
CAGACGCGGGGAGGACTCTTGAAT1493180.2039667362569731No Hit
CAGACGCGTCCCTTTGAATAGTCA1398100.1909789134336611No Hit
CAGACGCGAGAATCGTGCCGGAAA1378500.18830157511501455No Hit
CAGACGCGAGAATCGTGGTGCTGT1260620.17219929751286883No Hit
CAGACGCGCTGAGCAACAAAGGTA1195170.1632588999131026No Hit
CAGACGCGCAGGATCACCGCCCAT986470.13475071077526907No Hit
CAGACGCGCGATATAACTTATCGC948040.12950121528620848No Hit
CAGACGCGGCTCAGGACTCACTGT938330.12817484002732796No Hit
CAGACGCGCAGGATCACTAAGCAT860640.11756247196734576No Hit
CAGACGCGAGCCAAATGCAGGCAA846460.11562549965314126No Hit
CAGACGCGCAGTAATACGCCACTT825010.11269545338094898No Hit
CAGACGCGCTTGAATCTTCCAGCA815790.11143601158003463No Hit
CAGACGCGTACCTCCTGCGGATAG789460.10783936270605687No Hit
CAGACGCGGGGCTATGAGACTCAG759300.10371954006879257No Hit
CAGACGCGTACAACAACCTTTGAC758540.10361572490949812No Hit
CAGACGCGGCAGTTAACCGGTTGA758240.10357474524135557No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)