FastQCFastQC Report
Tue 14 Jan 2025
4DNFIBVE9WV8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIBVE9WV8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24733734
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGACAATTGGATCTTTGA600610.24283029808600676No Hit
CAGACGCGCAGCTACCTGGATCCC454450.1837369157443029No Hit
CAGACGCGCCATCACGAGTCAATA452970.18313854268829768No Hit
CAGACGCGTTCCTCACTTTCTTCG376180.1520918758162435No Hit
CAGACGCGTAACCGGACGGTTATG355040.14354484446222313No Hit
CAGACGCGGGATCCAGAACCAAAT348070.14072683081333373No Hit
CAGACGCGTCGATTCACTTCCTCC275690.11146315392572752No Hit
CAGACGCGCCTTTGGGAACAGGCT254450.10287569195981487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)