FastQCFastQC Report
Tue 14 Jan 2025
4DNFIBIVHTXQ.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename4DNFIBIVHTXQ.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13785560
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGGGAGGCTTGGCCATCA488960.35468997995003465No Hit
CAGACGCGGACGAGGGAAGCTAAT423940.3075246852503634No Hit
CAGACGCGTAGCCACCTCACTAAT312370.22659217325955563No Hit
CAGACGCGAACAGCTACGCGTTTC237820.1725138478233746No Hit
CAGACGCGCAGAGGGACCCAAACG209260.1517965175154292No Hit
CAGACGCGGATTCACCTAAGGATT190410.13812278935349745No Hit
CAGACGCGAAGTCGCGATCCCTGA168530.12225110913158406No Hit
CAGACGCGACCGGACACTTCCTGA168180.121997220279771No Hit
CAGACGCGACGCGAACTCATGACC155720.1129587771552262No Hit
CAGACGCGGATTGCAACTTCATCG146750.10645196858161729No Hit
CAGACGCGGTCACAGGACCTTGTG140990.10227368347749384No Hit
CAGACGCGTGCTAATCTATACCTG139120.10091719161209266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)